Peroxisome Biogenesis Factor 16

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OMIM Number

603360

NCBI Gene ID

9409

Uniprot ID

Q9Y5Y5

Length

9,150 bases

No. of Exons

11

No. of isoforms

2

Protein Name

Peroxisomal membrane protein PEX16

Molecular Mass

38629 Da

Amino Acid Count

336

Genomic Location

chr11:45,909,663-45,918,812

Gene Map Locus
11p11.2

Description

Peroxisomes are small, single-membrane organelles present in most eukaryotic cells.  These organelles contain peroxidases and other enzymes involved in several key metabolic processes such as free radical detoxification, lipid catabolism and biosynthesis, and hydrogen peroxide metabolism.  In humans, the PEX16 gene encodes Peroxisome Biogenesis Factor 16, a protein that forms an integral component of the peroxisomal membrane.  This protein is believed to play a role in peroxisome organization, peroxisome membrane biogenesis and protein import into the peroxisome matrix.  It has been found that the C-terminal region of PEX16, which is cytoplasmically exposed, is involved in peroxisome formation, while the first transmembrane domain and the positively charged region between amino acids 66-81 are responsible for peroxisome targeting. 

The gene is associated with the Peroxisome Biogenesis Disorders 8A and 8B (PBD8A & PBD8B).  PBD8A, also known as Zellweger syndrome, is characterized by profound hypotonia, seizures and craniofacial anomalies.  Most affected patients succumb to the disorder within the first year of life.  PBD8B is a milder condition and is characterized by neonatal adrenoleukodystrophy and infantile refsum disease.  Affected patients may require wheelchairs for movement and suffer from developmental delay, hypotonia and visual impairment. 

Epidemiology in the Arab World

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Variant NameCountryGenomic LocationClinvar Clinical SignificanceCTGA Clinical Significance Condition(s)HGVS ExpressionsdbSNPClinvar
NM_004813.4:c.460+5G>AUnited Arab EmiratesNC_000011.10:g.45915463C>TLikely Pathogenic, Uncertain SignificanceLikely PathogenicPeroxisome Biogenesis Disorder 8A (Zellweger)NG_008460.1:g.7661G>A; NM_004813.4:c.460+5G>A; NP_004804.2:p.?1339506
NM_004813.4:c.859C>TUnited Arab EmiratesNC_000011.10:g.45913847G>ALikely Pathogenic, Uncertain SignificanceLikely PathogenicPeroxisome Biogenesis Disorder 8B; Peroxisome Biogenesis Disorder 8A (Zellweger)NG_008460.1:g.9277C>T; NM_004813.4:c.859C>T; NP_004804.2:p.Arg287Cys769772100561075
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