Recombination-Activating Gene 2

Alternative Names

  • RAG2

Associated Diseases

Omenn Syndrome
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OMIM Number

179616

NCBI Gene ID

5897

Uniprot ID

P55895

Length

6,294 bases

No. of Exons

3

No. of isoforms

1

Protein Name

V(D)J recombination-activating protein 2

Molecular Mass

59241 Da

Amino Acid Count

527

Genomic Location

chr11:36,591,942-36,598,235

Gene Map Locus
11p12

Description

This gene encodes a protein that is involved in the initiation of V(D)J recombination during B and T cell development. This protein forms a complex with the product of the adjacent recombination activating gene 1, and this complex can form double-strand breaks by cleaving DNA at conserved recombination signal sequences. The recombination activating gene 1 component is thought to contain most of the catalytic activity, while the N-terminal of the recombination activating gene 2 component is thought to form a six-bladed propeller in the active core that serves as a binding scaffold for the tight association of the complex with DNA. A C-terminal plant homeodomain finger-like motif in this protein is necessary for interactions with chromatin components, specifically with histone H3 that is trimethylated at lysine 4. Mutations in this gene cause Omenn syndrome, a form of severe combined immunodeficiency associated with autoimmune-like symptoms. [From RefSeq]

Epidemiology in the Arab World

View Map
Variant NameCountryGenomic LocationClinvar Clinical SignificanceCTGA Clinical Significance Condition(s)HGVS ExpressionsdbSNPClinvar
NM_000536.3:c.1375A>CLebanonNC_000011.10:g.36592794T>GLikely PathogenicLikely PathogenicOmenn SyndromeNG_033154.1:g.3302T>G; NM_000536.3:c.1375A>C; NP_000527.2:p.Met459Leu1204766339496632
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